Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Gm26039-201ENSMUST00000158152 144 ntBASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Gm6257-201ENSMUST00000163864 910 ntBASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rpa1Q8VEE4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpa1Q8VEE4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Gm11434-201ENSMUST00000122379 629 ntBASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Gm30025-201ENSMUST00000218555 728 ntBASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.52■□□□□ 0.08
Rpa1Q8VEE4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpa1Q8VEE4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rpa1Q8VEE4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpa1Q8VEE4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Rpa1Q8VEE4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpa1Q8VEE4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rpa1Q8VEE4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpa1Q8VEE4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpa1Q8VEE4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms