Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Gm8318-201ENSMUST00000182954 872 ntBASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Gm44344-201ENSMUST00000200287 129 ntBASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lmcd1Q8VEE1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lmcd1Q8VEE1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lmcd1Q8VEE1 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.33■□□□□ 0.21
Lmcd1Q8VEE1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lmcd1Q8VEE1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Lmcd1Q8VEE1 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Gm13015-201ENSMUST00000118674 204 ntBASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Gm16026-204ENSMUST00000162652 683 ntBASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Gm6180-201ENSMUST00000065243 498 ntBASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.33■□□□□ 0.2
Lmcd1Q8VEE1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Gm13829-201ENSMUST00000119600 138 ntBASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lmcd1Q8VEE1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Gm27533-201ENSMUST00000183800 152 ntBASIC16.31■□□□□ 0.2
Lmcd1Q8VEE1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms