Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Top1mtQ8R4U6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Gm7153-201ENSMUST00000117092 455 ntBASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Gm6376-201ENSMUST00000209407 580 ntBASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Top1mtQ8R4U6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Gm8318-201ENSMUST00000182954 872 ntBASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Rps4l-201ENSMUST00000071745 943 ntBASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Top1mtQ8R4U6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Top1mtQ8R4U6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Top1mtQ8R4U6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Top1mtQ8R4U6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Top1mtQ8R4U6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Top1mtQ8R4U6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Top1mtQ8R4U6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Top1mtQ8R4U6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Top1mtQ8R4U6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms