Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Gm14722-201ENSMUST00000118943 689 ntBASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Gm4899-201ENSMUST00000178708 719 ntBASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chrna3Q8R4G9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chrna3Q8R4G9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chrna3Q8R4G9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chrna3Q8R4G9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chrna3Q8R4G9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Gm12260-201ENSMUST00000122447 411 ntBASIC15.08■□□□□ 0
Chrna3Q8R4G9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Gm8000-201ENSMUST00000188378 592 ntBASIC15.08■□□□□ 0
Chrna3Q8R4G9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chrna3Q8R4G9 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms