Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Zcchc9Q8R1J3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Zcchc9Q8R1J3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Auts2-212ENSMUST00000178555 309 ntBASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Zcchc9Q8R1J3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Zcchc9Q8R1J3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Zcchc9Q8R1J3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Zcchc9Q8R1J3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Zcchc9Q8R1J3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Zcchc9Q8R1J3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Zcchc9Q8R1J3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Zcchc9Q8R1J3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Gm7063-201ENSMUST00000186840 981 ntBASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Gm7787-201ENSMUST00000216858 688 ntBASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zcchc9Q8R1J3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms