Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim2Q8R1G6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Gm11336-201ENSMUST00000118168 334 ntBASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim2Q8R1G6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Gm12441-201ENSMUST00000121806 588 ntBASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim2Q8R1G6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdlim2Q8R1G6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdlim2Q8R1G6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdlim2Q8R1G6 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.64■□□□□ 0.41
Pdlim2Q8R1G6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim2Q8R1G6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms