Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx54Q8K4L0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 AC158529.1-201ENSMUST00000223618 239 ntBASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx54Q8K4L0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx54Q8K4L0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx54Q8K4L0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx54Q8K4L0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx54Q8K4L0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx54Q8K4L0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Ddx54Q8K4L0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Shd-206ENSMUST00000225145 998 ntBASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Gm5320-201ENSMUST00000207163 1519 ntBASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx54Q8K4L0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Gm24543-201ENSMUST00000103867 82 ntBASIC20■□□□□ 0.79
Ddx54Q8K4L0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Gm42612-201ENSMUST00000197986 623 ntBASIC20■□□□□ 0.79
Ddx54Q8K4L0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Gm43170-201ENSMUST00000199827 612 ntBASIC20■□□□□ 0.79
Ddx54Q8K4L0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20■□□□□ 0.79
Ddx54Q8K4L0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx54Q8K4L0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Gm45195-201ENSMUST00000205597 1008 ntBASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms