Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Gm6257-201ENSMUST00000163864 910 ntBASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Gm7370-201ENSMUST00000219471 767 ntBASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Timm23-208ENSMUST00000226683 750 ntBASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf4Q8K4J2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Gm12527-201ENSMUST00000117967 564 ntBASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Gm10566-201ENSMUST00000086739 996 ntBASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf4Q8K4J2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ebf4Q8K4J2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms