Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn1Q8K0T0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Gm11764-201ENSMUST00000120221 623 ntBASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Gm9682-201ENSMUST00000197505 556 ntBASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn1Q8K0T0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Mir5126-201ENSMUST00000175513 77 ntBASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn1Q8K0T0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Gm13036-201ENSMUST00000117799 748 ntBASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Gm2651-201ENSMUST00000203560 838 ntBASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.71■□□□□ 0.43
Rtn1Q8K0T0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rtn1Q8K0T0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rtn1Q8K0T0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 BC037039-201ENSMUST00000192003 2205 ntBASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms