Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rtn4rl1Q8K0S5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm13015-201ENSMUST00000118674 204 ntBASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rtn4rl1Q8K0S5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm5866-201ENSMUST00000177881 973 ntBASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.46■□□□□ 0.07
Rtn4rl1Q8K0S5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn4rl1Q8K0S5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn4rl1Q8K0S5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn4rl1Q8K0S5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn4rl1Q8K0S5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Gm13453-201ENSMUST00000118708 357 ntBASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Mir8102-201ENSMUST00000184148 139 ntBASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Gm6888-201ENSMUST00000221983 706 ntBASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4rl1Q8K0S5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Gm2423-201ENSMUST00000074863 733 ntBASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4rl1Q8K0S5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.43■□□□□ 0.06
Rtn4rl1Q8K0S5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn4rl1Q8K0S5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtn4rl1Q8K0S5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms