Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim61Q8JZK6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim61Q8JZK6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Gm45612-201ENSMUST00000211320 160 ntBASIC16.13■□□□□ 0.17
Trim61Q8JZK6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim61Q8JZK6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Gm18246-201ENSMUST00000221023 728 ntBASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim61Q8JZK6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.11■□□□□ 0.17
Trim61Q8JZK6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Thap2-203ENSMUST00000218989 527 ntBASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim61Q8JZK6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms