Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopaQ8CIE6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CopaQ8CIE6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CopaQ8CIE6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CopaQ8CIE6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CopaQ8CIE6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.7■□□□□ 0.1
CopaQ8CIE6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Gm15173-201ENSMUST00000122049 433 ntBASIC15.7■□□□□ 0.1
CopaQ8CIE6 Gm11780-201ENSMUST00000136880 516 ntBASIC15.7■□□□□ 0.1
CopaQ8CIE6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Gm8655-201ENSMUST00000221159 852 ntBASIC15.7■□□□□ 0.1
CopaQ8CIE6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopaQ8CIE6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.69■□□□□ 0.1
CopaQ8CIE6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.69■□□□□ 0.1
CopaQ8CIE6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.69■□□□□ 0.1
CopaQ8CIE6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Mir6404-201ENSMUST00000183699 94 ntBASIC15.69■□□□□ 0.1
CopaQ8CIE6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.69■□□□□ 0.1
CopaQ8CIE6 Gm6089-201ENSMUST00000197666 938 ntBASIC15.69■□□□□ 0.1
CopaQ8CIE6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.69■□□□□ 0.1
CopaQ8CIE6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.69■□□□□ 0.1
CopaQ8CIE6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopaQ8CIE6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CopaQ8CIE6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms