Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Mir1895-201ENSMUST00000122615 79 ntBASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rftn2Q8CHX7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Gm27494-201ENSMUST00000184735 189 ntBASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.28■□□□□ 0.2
Rftn2Q8CHX7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 App-207ENSMUST00000227737 2827 ntBASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Gm16198-201ENSMUST00000118766 670 ntBASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Gm26308-201ENSMUST00000157768 69 ntBASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Chchd1-203ENSMUST00000224633 557 ntBASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rftn2Q8CHX7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rftn2Q8CHX7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rftn2Q8CHX7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rftn2Q8CHX7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rftn2Q8CHX7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rftn2Q8CHX7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rftn2Q8CHX7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rftn2Q8CHX7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms