Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Rpph1-201ENSMUST00000175096 319 ntBASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Gm10154-201ENSMUST00000084445 354 ntBASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rab11fip3Q8CHD8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Gm25925-201ENSMUST00000158314 306 ntBASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.83■□□□□ 0.77
Rab11fip3Q8CHD8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rab11fip3Q8CHD8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rab11fip3Q8CHD8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rab11fip3Q8CHD8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rab11fip3Q8CHD8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rab11fip3Q8CHD8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.83■□□□□ 0.76
Rab11fip3Q8CHD8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Dancr-204ENSMUST00000132389 2347 ntBASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rab11fip3Q8CHD8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Rprl2-201ENSMUST00000157150 290 ntBASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rab11fip3Q8CHD8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rab11fip3Q8CHD8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Gm9385-201ENSMUST00000117563 472 ntBASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Gm20553-201ENSMUST00000204205 844 ntBASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab11fip3Q8CHD8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms