Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.05■□□□□ 0.64
Smc5Q8CG46 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.05■□□□□ 0.64
Smc5Q8CG46 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc5Q8CG46 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.04■□□□□ 0.64
Smc5Q8CG46 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.04■□□□□ 0.64
Smc5Q8CG46 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc5Q8CG46 Gm12620-201ENSMUST00000119791 1986 ntBASIC19.04■□□□□ 0.64
Smc5Q8CG46 Gm12612-201ENSMUST00000140182 1986 ntBASIC19.04■□□□□ 0.64
Smc5Q8CG46 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.03■□□□□ 0.64
Smc5Q8CG46 Gm15165-201ENSMUST00000118140 502 ntBASIC19.03■□□□□ 0.64
Smc5Q8CG46 Gm4459-201ENSMUST00000118750 468 ntBASIC19.03■□□□□ 0.64
Smc5Q8CG46 AA414768-201ENSMUST00000121924 1257 ntBASIC19.03■□□□□ 0.64
Smc5Q8CG46 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.03■□□□□ 0.64
Smc5Q8CG46 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.03■□□□□ 0.64
Smc5Q8CG46 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.03■□□□□ 0.64
Smc5Q8CG46 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smc5Q8CG46 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc5Q8CG46 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc5Q8CG46 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc5Q8CG46 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc5Q8CG46 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc5Q8CG46 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc5Q8CG46 Gm37297-201ENSMUST00000192974 2384 ntBASIC19.01■□□□□ 0.63
Smc5Q8CG46 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Gm8344-201ENSMUST00000119813 856 ntBASIC19.01■□□□□ 0.63
Smc5Q8CG46 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.01■□□□□ 0.63
Smc5Q8CG46 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Gm7506-201ENSMUST00000207758 815 ntBASIC19.01■□□□□ 0.63
Smc5Q8CG46 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc5Q8CG46 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms