Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc28bQ8CEG5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Gm13436-201ENSMUST00000120418 567 ntBASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc28bQ8CEG5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Gm27011-201ENSMUST00000182352 972 ntBASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Gm37722-201ENSMUST00000193757 208 ntBASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc28bQ8CEG5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ccdc28bQ8CEG5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc28bQ8CEG5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc28bQ8CEG5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc28bQ8CEG5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc28bQ8CEG5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.19■□□□□ 0.02
Ccdc28bQ8CEG5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms