Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
Fam228aQ8CDW1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.18■□□□□ 0.18
Fam228aQ8CDW1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Fam228aQ8CDW1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam228aQ8CDW1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.18■□□□□ 0.18
Fam228aQ8CDW1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Efs-202ENSMUST00000227037 2540 ntBASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Fam228aQ8CDW1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Fam228aQ8CDW1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Gm6623-201ENSMUST00000173570 544 ntBASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Fam228aQ8CDW1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Fam228aQ8CDW1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Fam228aQ8CDW1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms