Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim52Q8CDV4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Gm15483-201ENSMUST00000120338 456 ntBASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Gm24158-201ENSMUST00000175263 71 ntBASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim52Q8CDV4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim52Q8CDV4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim52Q8CDV4 App-207ENSMUST00000227737 2827 ntBASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.89■□□□□ 0.61
Trim52Q8CDV4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Gm18737-201ENSMUST00000173594 937 ntBASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.89■□□□□ 0.61
Trim52Q8CDV4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Dancr-204ENSMUST00000132389 2347 ntBASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim52Q8CDV4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim52Q8CDV4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gm15693-201ENSMUST00000120470 637 ntBASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gm14057-201ENSMUST00000120631 482 ntBASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms