Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa4Q8CA71 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa4Q8CA71 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.79■□□□□ 0.44
Shisa4Q8CA71 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shisa4Q8CA71 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.78■□□□□ 0.44
Shisa4Q8CA71 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Gm16198-201ENSMUST00000118766 670 ntBASIC17.77■□□□□ 0.44
Shisa4Q8CA71 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shisa4Q8CA71 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms