Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a2Q8CA03 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc46a2Q8CA03 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc46a2Q8CA03 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Slc46a2Q8CA03 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Gm25406-201ENSMUST00000157599 105 ntBASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Slc46a2Q8CA03 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Slc46a2Q8CA03 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms