Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Gm5682-201ENSMUST00000173402 505 ntBASIC16.97■□□□□ 0.31
Trim9Q8C7M3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim9Q8C7M3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim9Q8C7M3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim9Q8C7M3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim9Q8C7M3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim9Q8C7M3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim9Q8C7M3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Gm7862-201ENSMUST00000121461 292 ntBASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim9Q8C7M3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Gm7230-201ENSMUST00000173026 815 ntBASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.94■□□□□ 0.3
Trim9Q8C7M3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim9Q8C7M3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim9Q8C7M3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim9Q8C7M3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim9Q8C7M3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim9Q8C7M3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim9Q8C7M3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim9Q8C7M3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim9Q8C7M3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim9Q8C7M3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim9Q8C7M3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim9Q8C7M3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms