Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Gm16198-201ENSMUST00000118766 670 ntBASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Gm14822-201ENSMUST00000122247 291 ntBASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Gm27301-201ENSMUST00000184012 127 ntBASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Gm27397-201ENSMUST00000184997 107 ntBASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ubr7Q8BU04 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Gm23935-201ENSMUST00000102303 57 ntBASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Gm24270-201ENSMUST00000102326 57 ntBASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Gm15427-201ENSMUST00000117288 531 ntBASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Gm24245-201ENSMUST00000157318 57 ntBASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Gm2272-201ENSMUST00000194903 582 ntBASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.46■□□□□ 0.07
Ubr7Q8BU04 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ubr7Q8BU04 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ubr7Q8BU04 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ubr7Q8BU04 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ubr7Q8BU04 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ubr7Q8BU04 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ubr7Q8BU04 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Gm43575-201ENSMUST00000196420 516 ntBASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr7Q8BU04 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Gm17271-201ENSMUST00000165535 355 ntBASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Gm6736-201ENSMUST00000166583 948 ntBASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Gm10576-201ENSMUST00000191927 825 ntBASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ubr7Q8BU04 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms