Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scfd1Q8BRF7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scfd1Q8BRF7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scfd1Q8BRF7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Scfd1Q8BRF7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.52■□□□□ 0.39
Scfd1Q8BRF7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scfd1Q8BRF7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Gm44335-201ENSMUST00000196879 141 ntBASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Gm44297-201ENSMUST00000198304 141 ntBASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Gm44346-201ENSMUST00000198851 141 ntBASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scfd1Q8BRF7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 App-207ENSMUST00000227737 2827 ntBASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Scfd1Q8BRF7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scfd1Q8BRF7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scfd1Q8BRF7 Gm18889-201ENSMUST00000174284 929 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms