Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc40Q8BI79 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc40Q8BI79 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Ccdc40Q8BI79 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Gm15165-201ENSMUST00000118140 502 ntBASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Gm15372-201ENSMUST00000120729 834 ntBASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Asic1-205ENSMUST00000228185 1818 ntBASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ccdc40Q8BI79 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc40Q8BI79 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms