Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.32□□□□□ -0.12
Atg4dQ8BGV9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Gm5364-201ENSMUST00000216789 889 ntBASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Gm18246-201ENSMUST00000221023 728 ntBASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4dQ8BGV9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Atg4dQ8BGV9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Gm18206-201ENSMUST00000207027 926 ntBASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 AW822252-206ENSMUST00000208904 237 ntBASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Atg4dQ8BGV9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms