Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim6Q8BGE7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim6Q8BGE7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Mir770-201ENSMUST00000103252 94 ntBASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim6Q8BGE7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Gm15565-201ENSMUST00000118890 427 ntBASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms