Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Npas4Q8BGD7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npas4Q8BGD7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npas4Q8BGD7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.14■□□□□ 0.18
Npas4Q8BGD7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Npas4Q8BGD7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Npas4Q8BGD7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Gm9824-201ENSMUST00000178707 561 ntBASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Mir6977-201ENSMUST00000184960 64 ntBASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.12■□□□□ 0.17
Npas4Q8BGD7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Npas4Q8BGD7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Npas4Q8BGD7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Npas4Q8BGD7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Npas4Q8BGD7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Npas4Q8BGD7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Npas4Q8BGD7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Npas4Q8BGD7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Npas4Q8BGD7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Npas4Q8BGD7 Gm12428-201ENSMUST00000119844 727 ntBASIC16.11■□□□□ 0.17
Npas4Q8BGD7 Gm38225-201ENSMUST00000194001 393 ntBASIC16.11■□□□□ 0.17
Npas4Q8BGD7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms