Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lrrtm4Q80XG9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lrrtm4Q80XG9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lrrtm4Q80XG9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lrrtm4Q80XG9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.97□□□□□ -0.01
Lrrtm4Q80XG9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lrrtm4Q80XG9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.97□□□□□ -0.01
Lrrtm4Q80XG9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lrrtm4Q80XG9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.97□□□□□ -0.01
Lrrtm4Q80XG9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Gm15467-201ENSMUST00000120582 445 ntBASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Lrrtm4Q80XG9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lrrtm4Q80XG9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Lrrtm4Q80XG9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lrrtm4Q80XG9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Lrrtm4Q80XG9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lrrtm4Q80XG9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lrrtm4Q80XG9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Gm5264-201ENSMUST00000190584 848 ntBASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.94□□□□□ -0.02
Lrrtm4Q80XG9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lrrtm4Q80XG9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Lrrtm4Q80XG9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Lrrtm4Q80XG9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms