Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.4□□□□□ -0.74
Csmd3Q80T79 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Gm27920-201ENSMUST00000183953 96 ntBASIC10.4□□□□□ -0.74
Csmd3Q80T79 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Gm45331-201ENSMUST00000209868 554 ntBASIC10.4□□□□□ -0.74
Csmd3Q80T79 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.4□□□□□ -0.74
Csmd3Q80T79 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Csmd3Q80T79 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.4□□□□□ -0.75
Csmd3Q80T79 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.4□□□□□ -0.75
Csmd3Q80T79 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.4□□□□□ -0.75
Csmd3Q80T79 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.39□□□□□ -0.75
Csmd3Q80T79 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Csmd3Q80T79 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.38□□□□□ -0.75
Csmd3Q80T79 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.38□□□□□ -0.75
Csmd3Q80T79 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.38□□□□□ -0.75
Csmd3Q80T79 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.38□□□□□ -0.75
Csmd3Q80T79 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Csmd3Q80T79 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms