Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Mir8117-201ENSMUST00000184773 107 ntBASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh8Q7TSK3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Prob1-201ENSMUST00000097619 3021 ntBASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh8Q7TSK3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Grk6-207ENSMUST00000225925 2769 ntBASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Gm4995-201ENSMUST00000117247 432 ntBASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Gm25925-201ENSMUST00000158314 306 ntBASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Gm18489-201ENSMUST00000172565 551 ntBASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Gm27300-201ENSMUST00000184085 97 ntBASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Gm27335-201ENSMUST00000184758 97 ntBASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Gm9682-201ENSMUST00000197505 556 ntBASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh8Q7TSK3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh8Q7TSK3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms