Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm23547-201ENSMUST00000158210 271 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm29310-201ENSMUST00000185468 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21825-201ENSMUST00000185728 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm29109-201ENSMUST00000185895 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21896-201ENSMUST00000186520 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21873-201ENSMUST00000186728 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21794-201ENSMUST00000187056 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21880-201ENSMUST00000187275 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21826-201ENSMUST00000187451 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21198-201ENSMUST00000188393 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21749-201ENSMUST00000189343 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21901-201ENSMUST00000189568 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm29424-201ENSMUST00000189716 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm28599-201ENSMUST00000189838 694 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21867-201ENSMUST00000189917 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm29269-201ENSMUST00000190087 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21722-201ENSMUST00000190153 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm28423-201ENSMUST00000190701 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21899-201ENSMUST00000190745 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21910-201ENSMUST00000191163 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21849-201ENSMUST00000191571 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm28678-201ENSMUST00000191593 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm20910-201ENSMUST00000193268 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Gm21871-201ENSMUST00000194621 696 ntBASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nup98Q6PFD9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Gm14057-201ENSMUST00000120631 482 ntBASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.92■□□□□ 0.46
Nup98Q6PFD9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nup98Q6PFD9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Gm17837-201ENSMUST00000186435 985 ntBASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nup98Q6PFD9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nup98Q6PFD9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms