Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm13312-201ENSMUST00000119631 718 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm11950-201ENSMUST00000121615 838 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm8825-201ENSMUST00000182565 998 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm4518-201ENSMUST00000182638 718 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dhx40Q6PE54 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Gm14722-201ENSMUST00000118943 689 ntBASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Gm12134-201ENSMUST00000122109 520 ntBASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dhx40Q6PE54 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dhx40Q6PE54 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Dhx40Q6PE54 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Dhx40Q6PE54 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.08■□□□□ 0.33
Dhx40Q6PE54 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dhx40Q6PE54 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dhx40Q6PE54 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dhx40Q6PE54 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms