Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Gm43703-201ENSMUST00000200523 763 ntBASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Gm18049-201ENSMUST00000208909 581 ntBASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Gm9824-201ENSMUST00000178707 561 ntBASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Gm27533-201ENSMUST00000183800 152 ntBASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Gm38225-201ENSMUST00000194001 393 ntBASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd4Q6PDQ2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Gm8410-201ENSMUST00000117225 605 ntBASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Gm7775-201ENSMUST00000218871 853 ntBASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd4Q6PDQ2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd4Q6PDQ2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Gm13453-201ENSMUST00000118708 357 ntBASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Gm9719-201ENSMUST00000162765 543 ntBASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Gm25144-201ENSMUST00000179561 110 ntBASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Gm25352-201ENSMUST00000179815 110 ntBASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Mir6977-201ENSMUST00000184960 64 ntBASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms