Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VclQ64727 Gm14722-201ENSMUST00000118943 689 ntBASIC15.12■□□□□ 0.01
VclQ64727 Gm18489-201ENSMUST00000172565 551 ntBASIC15.12■□□□□ 0.01
VclQ64727 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.12■□□□□ 0.01
VclQ64727 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
VclQ64727 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.12■□□□□ 0.01
VclQ64727 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VclQ64727 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VclQ64727 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
VclQ64727 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
VclQ64727 Gm1401-201ENSMUST00000122048 772 ntBASIC15.11■□□□□ 0.01
VclQ64727 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.11■□□□□ 0.01
VclQ64727 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.11■□□□□ 0.01
VclQ64727 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.11■□□□□ 0.01
VclQ64727 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VclQ64727 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.11■□□□□ 0.01
VclQ64727 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VclQ64727 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.11■□□□□ 0.01
VclQ64727 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VclQ64727 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VclQ64727 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VclQ64727 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VclQ64727 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.1■□□□□ 0.01
VclQ64727 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VclQ64727 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
VclQ64727 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.1■□□□□ 0.01
VclQ64727 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.1■□□□□ 0.01
VclQ64727 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VclQ64727 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.1■□□□□ 0.01
VclQ64727 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.1■□□□□ 0.01
VclQ64727 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VclQ64727 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VclQ64727 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VclQ64727 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VclQ64727 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VclQ64727 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
VclQ64727 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.09■□□□□ 0.01
VclQ64727 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VclQ64727 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VclQ64727 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VclQ64727 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VclQ64727 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VclQ64727 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
VclQ64727 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.09■□□□□ 0.01
VclQ64727 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.09■□□□□ 0.01
VclQ64727 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VclQ64727 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.09■□□□□ 0.01
VclQ64727 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VclQ64727 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
VclQ64727 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VclQ64727 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VclQ64727 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VclQ64727 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VclQ64727 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
VclQ64727 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms