Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.73□□□□□ -0.53
Zfp248Q640N4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.72□□□□□ -0.53
Zfp248Q640N4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.72□□□□□ -0.53
Zfp248Q640N4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Zfp248Q640N4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Zfp248Q640N4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.71□□□□□ -0.53
Zfp248Q640N4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Gm15165-201ENSMUST00000118140 502 ntBASIC11.71□□□□□ -0.53
Zfp248Q640N4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.71□□□□□ -0.53
Zfp248Q640N4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Zfp248Q640N4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Zfp248Q640N4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Zfp248Q640N4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Zfp248Q640N4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Zfp248Q640N4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Zfp248Q640N4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Zfp248Q640N4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Zfp248Q640N4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Zfp248Q640N4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Zfp248Q640N4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Zfp248Q640N4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Zfp248Q640N4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.7□□□□□ -0.54
Zfp248Q640N4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms