Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Six2Q62232 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.39■□□□□ 0.21
Six2Q62232 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six2Q62232 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.38■□□□□ 0.21
Six2Q62232 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Six2Q62232 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.38■□□□□ 0.21
Six2Q62232 Efs-202ENSMUST00000227037 2540 ntBASIC16.38■□□□□ 0.21
Six2Q62232 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.38■□□□□ 0.21
Six2Q62232 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.38■□□□□ 0.21
Six2Q62232 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.38■□□□□ 0.21
Six2Q62232 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.38■□□□□ 0.21
Six2Q62232 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.38■□□□□ 0.21
Six2Q62232 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.38■□□□□ 0.21
Six2Q62232 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
Six2Q62232 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.38■□□□□ 0.21
Six2Q62232 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.38■□□□□ 0.21
Six2Q62232 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.38■□□□□ 0.21
Six2Q62232 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six2Q62232 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Six2Q62232 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.37■□□□□ 0.21
Six2Q62232 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.37■□□□□ 0.21
Six2Q62232 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Six2Q62232 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Six2Q62232 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Six2Q62232 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Six2Q62232 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.36■□□□□ 0.21
Six2Q62232 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Six2Q62232 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Six2Q62232 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.36■□□□□ 0.21
Six2Q62232 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.36■□□□□ 0.21
Six2Q62232 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.36■□□□□ 0.21
Six2Q62232 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six2Q62232 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.36■□□□□ 0.21
Six2Q62232 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.35■□□□□ 0.21
Six2Q62232 Gm10499-201ENSMUST00000174094 934 ntBASIC16.35■□□□□ 0.21
Six2Q62232 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.35■□□□□ 0.21
Six2Q62232 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.35■□□□□ 0.21
Six2Q62232 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.35■□□□□ 0.21
Six2Q62232 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Celf4-206ENSMUST00000224553 1729 ntBASIC16.35■□□□□ 0.21
Six2Q62232 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Six2Q62232 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms