Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.3□□□□□ -0.12
VcanQ62059 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
VcanQ62059 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
VcanQ62059 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 Gm15678-201ENSMUST00000117573 960 ntBASIC14.3□□□□□ -0.12
VcanQ62059 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.3□□□□□ -0.12
VcanQ62059 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
VcanQ62059 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.3□□□□□ -0.12
VcanQ62059 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.3□□□□□ -0.12
VcanQ62059 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VcanQ62059 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.29□□□□□ -0.12
VcanQ62059 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.29□□□□□ -0.12
VcanQ62059 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.29□□□□□ -0.12
VcanQ62059 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VcanQ62059 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.29□□□□□ -0.12
VcanQ62059 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.29□□□□□ -0.12
VcanQ62059 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.29□□□□□ -0.12
VcanQ62059 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcanQ62059 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.28□□□□□ -0.12
VcanQ62059 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.28□□□□□ -0.12
VcanQ62059 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VcanQ62059 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.28□□□□□ -0.12
VcanQ62059 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.28□□□□□ -0.12
VcanQ62059 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.28□□□□□ -0.12
VcanQ62059 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.28□□□□□ -0.12
VcanQ62059 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.28□□□□□ -0.12
VcanQ62059 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.28□□□□□ -0.12
VcanQ62059 Gm16570-201ENSMUST00000161951 436 ntBASIC14.28□□□□□ -0.12
VcanQ62059 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.28□□□□□ -0.12
VcanQ62059 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.28□□□□□ -0.12
VcanQ62059 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.28□□□□□ -0.12
VcanQ62059 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.28□□□□□ -0.12
VcanQ62059 Gm15483-201ENSMUST00000120338 456 ntBASIC14.28□□□□□ -0.12
VcanQ62059 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.28□□□□□ -0.12
VcanQ62059 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcanQ62059 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VcanQ62059 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcanQ62059 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcanQ62059 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcanQ62059 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcanQ62059 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VcanQ62059 Gm17420-201ENSMUST00000164753 153 ntBASIC14.27□□□□□ -0.12
VcanQ62059 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.27□□□□□ -0.12
VcanQ62059 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcanQ62059 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcanQ62059 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcanQ62059 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VcanQ62059 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcanQ62059 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.27□□□□□ -0.13
VcanQ62059 Gm4875-201ENSMUST00000118257 786 ntBASIC14.27□□□□□ -0.13
VcanQ62059 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcanQ62059 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcanQ62059 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.27□□□□□ -0.13
VcanQ62059 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcanQ62059 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcanQ62059 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.26□□□□□ -0.13
VcanQ62059 Gm37466-201ENSMUST00000195692 652 ntBASIC14.26□□□□□ -0.13
VcanQ62059 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.26□□□□□ -0.13
VcanQ62059 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VcanQ62059 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.26□□□□□ -0.13
VcanQ62059 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms