Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Zic4Q61467 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zic4Q61467 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Zic4Q61467 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Zic4Q61467 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zic4Q61467 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.48□□□□□ -0.41
Zic4Q61467 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Zic4Q61467 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zic4Q61467 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zic4Q61467 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zic4Q61467 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zic4Q61467 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zic4Q61467 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zic4Q61467 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.47□□□□□ -0.41
Zic4Q61467 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Zic4Q61467 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Zic4Q61467 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Zic4Q61467 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.47□□□□□ -0.41
Zic4Q61467 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.47□□□□□ -0.41
Zic4Q61467 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.47□□□□□ -0.41
Zic4Q61467 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.47□□□□□ -0.41
Zic4Q61467 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zic4Q61467 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Zic4Q61467 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Zic4Q61467 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Zic4Q61467 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Zic4Q61467 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Zic4Q61467 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Zic4Q61467 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.46□□□□□ -0.41
Zic4Q61467 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Zic4Q61467 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.46□□□□□ -0.41
Zic4Q61467 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Zic4Q61467 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Zic4Q61467 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Zic4Q61467 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Zic4Q61467 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.46□□□□□ -0.41
Zic4Q61467 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Zic4Q61467 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Zic4Q61467 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Zic4Q61467 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Zic4Q61467 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Zic4Q61467 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Zic4Q61467 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Zic4Q61467 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Zic4Q61467 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.46□□□□□ -0.42
Zic4Q61467 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Zic4Q61467 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Zic4Q61467 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Zic4Q61467 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Zic4Q61467 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Gm37722-201ENSMUST00000193757 208 ntBASIC12.45□□□□□ -0.42
Zic4Q61467 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Zic4Q61467 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Zic4Q61467 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Zic4Q61467 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Zic4Q61467 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Zic4Q61467 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Zic4Q61467 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.44□□□□□ -0.42
Zic4Q61467 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms