Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.2□□□□□ -0.3
Clns1aQ61189 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clns1aQ61189 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Clns1aQ61189 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clns1aQ61189 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clns1aQ61189 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clns1aQ61189 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Clns1aQ61189 Gm20760-201ENSMUST00000179197 648 ntBASIC13.19□□□□□ -0.3
Clns1aQ61189 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Clns1aQ61189 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clns1aQ61189 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clns1aQ61189 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clns1aQ61189 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Clns1aQ61189 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Clns1aQ61189 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clns1aQ61189 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clns1aQ61189 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.18□□□□□ -0.3
Clns1aQ61189 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Clns1aQ61189 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Clns1aQ61189 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.18□□□□□ -0.3
Clns1aQ61189 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Clns1aQ61189 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Gm7370-201ENSMUST00000219471 767 ntBASIC13.18□□□□□ -0.3
Clns1aQ61189 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Clns1aQ61189 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Clns1aQ61189 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.18□□□□□ -0.3
Clns1aQ61189 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.18□□□□□ -0.3
Clns1aQ61189 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Clns1aQ61189 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clns1aQ61189 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Efs-202ENSMUST00000227037 2540 ntBASIC13.17□□□□□ -0.3
Clns1aQ61189 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.17□□□□□ -0.3
Clns1aQ61189 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Clns1aQ61189 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.17□□□□□ -0.3
Clns1aQ61189 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.17□□□□□ -0.3
Clns1aQ61189 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.17□□□□□ -0.3
Clns1aQ61189 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.17□□□□□ -0.3
Clns1aQ61189 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.17□□□□□ -0.3
Clns1aQ61189 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.17□□□□□ -0.3
Clns1aQ61189 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Clns1aQ61189 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Clns1aQ61189 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Clns1aQ61189 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clns1aQ61189 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Clns1aQ61189 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.16□□□□□ -0.3
Clns1aQ61189 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Clns1aQ61189 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 Gm13474-201ENSMUST00000122466 815 ntBASIC13.16□□□□□ -0.3
Clns1aQ61189 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.16□□□□□ -0.3
Clns1aQ61189 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Clns1aQ61189 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clns1aQ61189 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.16□□□□□ -0.3
Clns1aQ61189 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms