Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Gm27920-201ENSMUST00000183953 96 ntBASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.96■□□□□ 0.79
Scaf1Q5U4C3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Gm29541-201ENSMUST00000191351 678 ntBASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Scaf1Q5U4C3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Gm6415-201ENSMUST00000118488 348 ntBASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scaf1Q5U4C3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Gm15483-201ENSMUST00000120338 456 ntBASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Gm27618-201ENSMUST00000183671 60 ntBASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scaf1Q5U4C3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms