Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Gm7284-201ENSMUST00000131667 944 ntBASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7-2Q5R1I3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7-2Q5R1I3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7-2Q5R1I3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms