Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Gm14494-201ENSMUST00000118786 435 ntBASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Gm11594-201ENSMUST00000122313 162 ntBASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6d-4Q5R1I0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Trav6d-4Q5R1I0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6d-4Q5R1I0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6d-4Q5R1I0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6d-4Q5R1I0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6d-4Q5R1I0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms