Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav8d-1Q5R1H8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav8d-1Q5R1H8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav8d-1Q5R1H8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav8d-1Q5R1H8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav8d-1Q5R1H8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Gm18115-201ENSMUST00000221209 621 ntBASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav8d-1Q5R1H8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav8d-1Q5R1H8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav8d-1Q5R1H8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms