Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Ank2-226ENSMUST00000189368 339 ntBASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Gm21362-201ENSMUST00000194272 928 ntBASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5d-4Q5R1F6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Gm19164-201ENSMUST00000210667 640 ntBASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Gm8655-201ENSMUST00000221159 852 ntBASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav5d-4Q5R1F6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.23□□□□□ -0.29
Trav5d-4Q5R1F6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms