Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Gm25745-201ENSMUST00000174945 133 ntBASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Gm18622-201ENSMUST00000219361 595 ntBASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-3Q5R1E6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-3Q5R1E6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-3Q5R1E6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-3Q5R1E6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-3Q5R1E6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-3Q5R1E6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-3Q5R1E6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms