Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm22065-201ENSMUST00000103753 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm22066-201ENSMUST00000103761 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm24932-201ENSMUST00000103763 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm24115-201ENSMUST00000103799 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm22190-201ENSMUST00000103827 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm22191-201ENSMUST00000103831 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm24721-201ENSMUST00000103849 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm28018-201ENSMUST00000103869 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm26399-201ENSMUST00000103937 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm25349-201ENSMUST00000177728 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm23616-201ENSMUST00000177797 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm25871-201ENSMUST00000177816 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm24752-201ENSMUST00000178240 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm24496-201ENSMUST00000178287 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm25649-201ENSMUST00000178476 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm25548-201ENSMUST00000178681 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm23147-201ENSMUST00000178841 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm26095-201ENSMUST00000179270 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm22171-201ENSMUST00000179283 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm23936-201ENSMUST00000179354 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm22619-201ENSMUST00000179516 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm25255-201ENSMUST00000179579 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm24755-201ENSMUST00000179691 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm26506-201ENSMUST00000179692 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm25086-201ENSMUST00000179931 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm23243-201ENSMUST00000180047 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm24659-201ENSMUST00000180212 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm24169-201ENSMUST00000180244 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm23689-201ENSMUST00000180354 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm27359-201ENSMUST00000184153 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm27785-201ENSMUST00000184268 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm27466-201ENSMUST00000184396 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm27703-201ENSMUST00000184836 110 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm2272-201ENSMUST00000194903 582 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.63■□□□□ 0.09
Rnf43Q5NCP0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf43Q5NCP0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms