Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Vps13aQ5H8C4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps13aQ5H8C4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps13aQ5H8C4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps13aQ5H8C4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps13aQ5H8C4 Gm13392-201ENSMUST00000117708 150 ntBASIC15.08■□□□□ 0
Vps13aQ5H8C4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps13aQ5H8C4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps13aQ5H8C4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps13aQ5H8C4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps13aQ5H8C4 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.08■□□□□ 0
Vps13aQ5H8C4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.08■□□□□ 0
Vps13aQ5H8C4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Gm27920-201ENSMUST00000183953 96 ntBASIC15.07■□□□□ 0
Vps13aQ5H8C4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.07■□□□□ 0
Vps13aQ5H8C4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps13aQ5H8C4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Gm8062-201ENSMUST00000139696 444 ntBASIC15.06■□□□□ 0
Vps13aQ5H8C4 Mir1982-201ENSMUST00000157368 74 ntBASIC15.06■□□□□ 0
Vps13aQ5H8C4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.06■□□□□ 0
Vps13aQ5H8C4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.06■□□□□ 0
Vps13aQ5H8C4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.06■□□□□ 0
Vps13aQ5H8C4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Gm20445-201ENSMUST00000061905 565 ntBASIC15.06■□□□□ 0
Vps13aQ5H8C4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.06■□□□□ 0
Vps13aQ5H8C4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.05■□□□□ 0
Vps13aQ5H8C4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps13aQ5H8C4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps13aQ5H8C4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps13aQ5H8C4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vps13aQ5H8C4 Gm11543-201ENSMUST00000120758 370 ntBASIC15.05■□□□□ -0
Vps13aQ5H8C4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps13aQ5H8C4 Gm10478-201ENSMUST00000084451 396 ntBASIC15.05■□□□□ -0
Vps13aQ5H8C4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vps13aQ5H8C4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps13aQ5H8C4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Vps13aQ5H8C4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps13aQ5H8C4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps13aQ5H8C4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.05■□□□□ -0
Vps13aQ5H8C4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vps13aQ5H8C4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vps13aQ5H8C4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps13aQ5H8C4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Vps13aQ5H8C4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vps13aQ5H8C4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.04■□□□□ -0
Vps13aQ5H8C4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms