Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Gm11780-201ENSMUST00000136880 516 ntBASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Gm27459-201ENSMUST00000184860 107 ntBASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf20Q5DTM8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 BC037039-201ENSMUST00000192003 2205 ntBASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf20Q5DTM8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Gm27646-201ENSMUST00000183989 110 ntBASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Gm6296-201ENSMUST00000222599 943 ntBASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf20Q5DTM8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm44357-201ENSMUST00000195897 142 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm19658-201ENSMUST00000196231 138 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm44367-201ENSMUST00000196836 138 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm44350-201ENSMUST00000197197 138 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm44390-201ENSMUST00000197533 144 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm44313-201ENSMUST00000198018 138 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm44486-201ENSMUST00000198508 138 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm44314-201ENSMUST00000199263 138 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm44394-201ENSMUST00000199558 138 ntBASIC18.29■□□□□ 0.52
Rnf20Q5DTM8 Gm44484-201ENSMUST00000199873 138 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms