Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.35■□□□□ 0.21
Syne3Q4FZC9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.34■□□□□ 0.21
Syne3Q4FZC9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Syne3Q4FZC9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.33■□□□□ 0.21
Syne3Q4FZC9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Syne3Q4FZC9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.33■□□□□ 0.21
Syne3Q4FZC9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Mir8098-201ENSMUST00000184011 137 ntBASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Syne3Q4FZC9 BC037039-201ENSMUST00000192003 2205 ntBASIC16.33■□□□□ 0.2
Syne3Q4FZC9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Syne3Q4FZC9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Gm6376-201ENSMUST00000209407 580 ntBASIC16.31■□□□□ 0.2
Syne3Q4FZC9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Rps4l-201ENSMUST00000071745 943 ntBASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.31■□□□□ 0.2
Syne3Q4FZC9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms