Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Carmil2Q3V3V9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Carmil2Q3V3V9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Carmil2Q3V3V9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Carmil2Q3V3V9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Carmil2Q3V3V9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Carmil2Q3V3V9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Carmil2Q3V3V9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.21■□□□□ 0.34
Carmil2Q3V3V9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Carmil2Q3V3V9 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.21■□□□□ 0.34
Carmil2Q3V3V9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Carmil2Q3V3V9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 AA543401-201ENSMUST00000164248 1269 ntBASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Gm20949-201ENSMUST00000206478 952 ntBASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Carmil2Q3V3V9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.18■□□□□ 0.34
Carmil2Q3V3V9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms